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H  1.0      -1.014036    0.585454  -1.238679
 
H  1.0      -1.014036    0.585454  -1.238679
 
H  1.0        1.014036    0.585454  -1.238679  
 
H  1.0        1.014036    0.585454  -1.238679  
  $END
+
  $END</pre>
</pre>
+
2/ Let fragment orbitals to polarize in the full complex.
2/ Let converged fragment orbitals, to polarize in the full complex.
 
  
3/ Let  delocalize. This is just a standard DFT calculation.
+
3/ Let  delocalize. This is just a standard DFT calculation. (TO CHECK with Yirong)
  
Remark :  
+
'''Remarks :'''
 +
B3LYP calculation in Gamess is specified in $CONTRL :
 +
<pre>$CONTRL
 +
SCFTYP=RHF DFTTYP=B3LYP
 +
runtyp=energy maxit=200 icharg=0
 +
$END</pre>
 +
And 6-31G(d) basis set is requested with
 +
<pre>$BASIS  GBASIS=N31 NGAUSS=6 NDFUNC=1 $END</pre>
  
 
[[VBFile 4-4 | all input files are there]]
 
[[VBFile 4-4 | all input files are there]]

Version du 5 juin 2012 à 16:49

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BLW method & HuLiS program


To the Tutors

Sason remarks and prospective 2 hours talk +

Philippe's remark on the initially proposed tutorial. are included in bold.

Qualitative

  • ?...

Computational

Proposal from Yirong

  • 1) benzene and formamide - focus is on the structural and energetic impact from conjugation, and how to correlate the results with experimental evidences;
  • 2) butadiene - focus is on the conjugation in the planar structure and the hyperconjugation in the staggered structure, and their impact on the rotational barrier;
  • 3) acid-base and H-bonding systems: BLW energy decomposition analyses.
  • 4) visualize the results. I have been using GaussView and ChemDraw, but other graphical software should be fine with me as well.
  • 5) Questions from any participant can be discussed and tested on site.

Exercices

Exercice 1 (title)

Subject

Here is a image example

Example alt text
Image example: Allyl Cation MO's

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 a line that starts with a blanck character make a sort of box 

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To do

Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text

Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text Text text

Access to files :

allyl.bfi, .xmi and orb

butadiene.xmi

Exercice 2 (title)

Exercice 3 (title)

Exercice 4 (BH3... NH3) electronics at the B3LYP 6-31G(d) level

BLW energy decomposition analysis can be used to shed light into the nature of intermolecular interactions. Example of NH3∙∙∙BH3. Visualize the polarization and electron transfer effects using the electron density difference (EDD) maps.

1/ Make orbitals of BH3 alone (then NH3) in the geometry of the complex

$DATA
BLW-ED Analysis
C1  1
N   7.0        0.000000    0.000000    0.728869
H   1.0        0.000000    0.951707    1.095972
H   1.0        0.824202   -0.475853    1.095972
H   1.0       -0.824202   -0.475853    1.095972
B   5.0        0.000000    0.000000   -0.934793
H   1.0        0.000000   -1.170908   -1.238679
H   1.0       -1.014036    0.585454   -1.238679
H   1.0        1.014036    0.585454   -1.238679 
 $END

2/ Let fragment orbitals to polarize in the full complex.

3/ Let delocalize. This is just a standard DFT calculation. (TO CHECK with Yirong)

Remarks : B3LYP calculation in Gamess is specified in $CONTRL :

$CONTRL 
SCFTYP=RHF DFTTYP=B3LYP 
runtyp=energy maxit=200 icharg=0 
$END

And 6-31G(d) basis set is requested with

$BASIS  GBASIS=N31 NGAUSS=6 NDFUNC=1 $END

all input files are there