VBTutorial1
Révision datée du 28 juin 2012 à 22:44 par Benoit (discussion | contributions)
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Exercise 2 : Starting up with the H<math>{}_2</math> molecule
Two Gamess and XMVB input files for the H<math>{}_2</math> molecule are provided in the Exercise folder on the tutorial machines :
- the file h2-atom.xmi input uses the fragment specification in terms of atoms (frgtyp=atom) ;
- the file h2-sao.xmi input uses the fragment specification in terms of symmetry-adapted orbitals (frgtyp=sao).
There are VBSCF calculations with the 6-31G(d,p) basis set. Just inspect these inputs, run the gamess-xmvb program (using : vbrun h2-atom and : vbrun h2-sao, and analyze the outputs.
Then these input files could serve you as templates for the next exercises.
Before moving to the next exercises, please read the following :
>>> general guidelines for BOVB calculations
Exercise 3 : HF molecule : weights and bond energy
- Compute a VBSCF three structure wave function for the HF molecule, using the frgtyp=sao specification and automatic guess (guess=auto). Which structure(s) should be kept in further BOVB calculations ?
- Using VBSCF orbitals as guess orbitals :
- Compute a L-BOVB wave function on a selected subset of structures ;
- Compute a VBCISD wave function for the multi-structure wave function
- Compare structure weights at the VBSCF, L-BOVB and VBCI levels
- Compute bond energies at the L-BOVB and VBCISD levels.
Exercise 4 : F<math>{}_2</math> molecule and charge-shift resonance energy
- Compute a VBSCF wave function for the F<math>{}_2</math> molecule, using the cc-pvtz basis set, and with inactive orbitals localized on only one of the fluorine atoms ;
- first the frgtyp=sao specification and automatic guess (guess=auto) ;
- second the frgtyp=atom specification and providing HF MOs as guess orbital through an extra $Gus section in the xmvb input
- BOVB level :
- Compute a L-BOVB wave function using VBSCF orbitals as guess orbitals ;
- Starting from the previous solution, compute a D-BOVB solution, by allowing only the inactive to delocalize onto the two atoms, while the active orbitals are kept frozen. Compare total energy with the previous level.
- We want to calculate the charge-shift resonance energy (RE_CS) for the F<math>{}_2</math> molecule. For that, we have to compute a VB wave-function corresponding to a single covalent structure, and take the energy difference with the full (covalent+ionic) wave-function.
- Compute a purely covalent wave function for F<math>{}_2</math> at the VBSCF level. What would be the L-BOVB solution ?
- Compute a purely covalent wave function for F<math>{}_2</math> at the D-BOVB level.
- Deduce the RE_CS at the VBSCF, L-BOVB and D-BOVB. Compare its value computed at the D-BOVB level with the bond energy (Experimental : ~40 kcal/mol).
Exercice 5 : Solvent effect on C(Me)<math>{}_3</math>-Cl weights
- C(Me)<math>{}_3</math>-Cl at equilibrium geometry :
- Compute a VBSCF wave function using frgtyp=atom and a $Gus section to specify guess orbitals. The active electron pair will be the C-Cl bond, and all inactive orbitals should be localized either on Cl or on the C(Me3) fragment. Which structures should be kept in further BOVB calculations ?
- Compute a L-BOVB wave function.
- Compute a D-BOVB wave function, by freezing the active orbitals, and delocalizing all inactive orbitals onto the whole molecule.
- Starting from guess orbitals obtained at equilibrium geometry, redo the D-BOVB calculation for the large inter fragment distance. How does the weights of the different structures evolve when the molecule is stretched ?
- Redo the D-BOVB calculations at equilibrium geometry and large distance using VBPCM for water. How does the weights change with solvation effects ?